[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 70 items for (author: kock & flygaard & r)

EMDB-17256:
Cryo-EM structure of ATP8B1-CDC50A in E1-ATP conformation
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

EMDB-17257:
Cryo-EM structure of ATP8B1-CDC50A in E1P-ADP conformation
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

EMDB-17258:
Cryo-EM structure of ATP8B1-CDC50A in E1P conformation
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

EMDB-17259:
Cryo-EM structure of ATP8B1-CDC50A in E2P autoinhibited "closed" conformation
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

EMDB-17260:
Cryo-EM structure of ATP8B1-CDC50A in E2P autoinhibited "open" conformation
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

EMDB-17261:
Cryo-EM structure of ATP8B1-CDC50A in E2P active conformation with bound PC
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

EMDB-17262:
Cryo-EM structure of ATP8B1-CDC50A in E2-Pi conformation with occluded PS
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

EMDB-17263:
Cryo-EM structure of ATP8B1-CDC50A in E2-Pi conformation with occluded PC
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

EMDB-17264:
Cryo-EM structure of ATP8B1-CDC50A in E2-Pi conformation with occluded PI
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

PDB-8ox4:
Cryo-EM structure of ATP8B1-CDC50A in E1-ATP conformation
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

PDB-8ox5:
Cryo-EM structure of ATP8B1-CDC50A in E1P-ADP conformation
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

PDB-8ox6:
Cryo-EM structure of ATP8B1-CDC50A in E1P conformation
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

PDB-8ox7:
Cryo-EM structure of ATP8B1-CDC50A in E2P autoinhibited "closed" conformation
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

PDB-8ox8:
Cryo-EM structure of ATP8B1-CDC50A in E2P autoinhibited "open" conformation
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

PDB-8ox9:
Cryo-EM structure of ATP8B1-CDC50A in E2P active conformation with bound PC
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

PDB-8oxa:
Cryo-EM structure of ATP8B1-CDC50A in E2-Pi conformation with occluded PS
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

PDB-8oxb:
Cryo-EM structure of ATP8B1-CDC50A in E2-Pi conformation with occluded PC
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

PDB-8oxc:
Cryo-EM structure of ATP8B1-CDC50A in E2-Pi conformation with occluded PI
Method: single particle / : Dieudonne T, Kummerer F, Juknaviciute Laursen M, Stock C, Kock Flygaard R, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

EMDB-16184:
Cryo-EM structure of the I-II-III2-IV2 respiratory supercomplex from Tetrahymena thermophila
Method: single particle / : Muhleip A, Kock Flygaard R, Baradaran R, Amunts A

PDB-8bqs:
Cryo-EM structure of the I-II-III2-IV2 respiratory supercomplex from Tetrahymena thermophila
Method: single particle / : Muhleip A, Kock Flygaard R, Baradaran R, Amunts A

EMDB-13981:
Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution
Method: single particle / : Singh V, Itoh Y, Andrell J, Aibara S, Amunts A

PDB-7qi5:
Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution
Method: single particle / : Singh V, Itoh Y, Amunts A

EMDB-13982:
Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution
Method: single particle / : Singh V, Itoh Y, Amunts A, Aibara S

PDB-7qi6:
Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution
Method: single particle / : Singh V, Itoh Y, Amunts A

EMDB-15900:
Subtomogram average of the respiratory supercomplex from Tetrahymena thermophila mitochondria
Method: subtomogram averaging / : Muhleip A, Amunts A

EMDB-15865:
Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

EMDB-15866:
Cryo-EM structure of succinate dehydrogenase complex (complex-II) in respiratory supercomplex of Tetrahymena thermophila
Method: single particle / : Muhleip A, Kock Flygaard R, Baradaran R, Amunts A

EMDB-15867:
Cryo-EM structure of cytochrome c oxidase dimer (complex IV) from respiratory supercomplex of Tetrahymena thermophila
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

EMDB-15868:
Cryo-EM structure of cytochrome bc1 complex (complex-III) from respiratory supercomplex of Tetrahymena thermophila
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

PDB-8b6f:
Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

PDB-8b6g:
Cryo-EM structure of succinate dehydrogenase complex (complex-II) in respiratory supercomplex of Tetrahymena thermophila
Method: single particle / : Muhleip A, Kock Flygaard R, Baradaran R, Amunts A

PDB-8b6h:
Cryo-EM structure of cytochrome c oxidase dimer (complex IV) from respiratory supercomplex of Tetrahymena thermophila
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

PDB-8b6j:
Cryo-EM structure of cytochrome bc1 complex (complex-III) from respiratory supercomplex of Tetrahymena thermophila
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

EMDB-14709:
Cryo-EM structure of human NKCC1 (TM domain)
Method: single particle / : Nissen P, Fenton R, Neumann C, Lindtoft Rosenbaek L, Kock Flygaard R, Habeck M, Lykkegaard Karlsen J, Wang Y, Lindorff-Larsen K, Gad H, Hartmann R, Lyons J

PDB-7zgo:
Cryo-EM structure of human NKCC1 (TM domain)
Method: single particle / : Nissen P, Fenton R, Neumann C, Lindtoft Rosenbaek L, Kock Flygaard R, Habeck M, Lykkegaard Karlsen J, Wang Y, Lindorff-Larsen K, Gad H, Hartmann R, Lyons J

EMDB-13980:
Human mitochondrial ribosome at 2.2 A resolution
Method: single particle / : Singh V, Itoh Y, Andrell J, Aibara S, Amunts A

PDB-7qi4:
Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA)
Method: single particle / : Singh V, Itoh Y, Amunts A

EMDB-11403:
Subtomogram average of the ATP synthase dimer from Toxoplasma gondii ATPTG11-KO mitochondrial membranes
Method: subtomogram averaging / : Muhleip A, Amunts A

EMDB-10520:
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, membrane region map
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

EMDB-10521:
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, OSCP/F1/c-ring map
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

EMDB-10522:
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, peripheral stalk map
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

EMDB-10523:
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, rotor-stator map
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

EMDB-10524:
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, consensus map
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

EMDB-10525:
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase hexamer, membrane region
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

EMDB-10526:
Subtomogram average of ATP synthase dimer from Toxoplasma gondii mitochondrial membranes
Method: subtomogram averaging / : Muhleip A, Amunts A

EMDB-10527:
Subtomogram average of the ATP synthase dimer from Toxoplasma gondii mitochondria
Method: subtomogram averaging / : Muhleip A, Amunts A

PDB-6tmg:
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, membrane region model
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

PDB-6tmh:
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, OSCP/F1/c-ring model
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

PDB-6tmi:
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, peripheral stalk model
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

PDB-6tmj:
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, rotor-stator model
Method: single particle / : Muhleip A, Kock Flygaard R, Amunts A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more